INDRA Network Search Modules Reference
- Autocomplete (
indra_network_search.autocomplete.autocomplete) - Data Models (
indra_network_search.data_models)ApiOptionsBreadthFirstSearchOptionsBreadthFirstSearchOptions.allow_edgeBreadthFirstSearchOptions.depth_limitBreadthFirstSearchOptions.edge_filterBreadthFirstSearchOptions.hashesBreadthFirstSearchOptions.max_memoryBreadthFirstSearchOptions.max_per_nodeBreadthFirstSearchOptions.node_blacklistBreadthFirstSearchOptions.node_filterBreadthFirstSearchOptions.path_limitBreadthFirstSearchOptions.reverseBreadthFirstSearchOptions.signBreadthFirstSearchOptions.source_nodeBreadthFirstSearchOptions.strict_mesh_id_filteringBreadthFirstSearchOptions.terminal_ns
DijkstraOptionsEdgeDataEdgeDataByHashFilterOptionsFilterOptions.allowed_nsFilterOptions.belief_cutoffFilterOptions.context_weightedFilterOptions.cull_best_nodeFilterOptions.curated_db_onlyFilterOptions.max_pathsFilterOptions.node_blacklistFilterOptions.overall_weightedFilterOptions.path_lengthFilterOptions.stmt_filterFilterOptions.weightedFilterOptions.no_filters()FilterOptions.no_node_filters()FilterOptions.no_stmt_filters()
MultiInteractorsOptionsMultiInteractorsOptions.allowed_nsMultiInteractorsOptions.belief_cutoffMultiInteractorsOptions.curated_db_onlyMultiInteractorsOptions.downstreamMultiInteractorsOptions.hash_blacklistMultiInteractorsOptions.max_resultsMultiInteractorsOptions.node_blacklistMultiInteractorsOptions.nodesMultiInteractorsOptions.source_filterMultiInteractorsOptions.stmt_types
MultiInteractorsRestQueryMultiInteractorsRestQuery.allowed_nsMultiInteractorsRestQuery.belief_cutoffMultiInteractorsRestQuery.curated_db_onlyMultiInteractorsRestQuery.downstreamMultiInteractorsRestQuery.max_resultsMultiInteractorsRestQuery.node_blacklistMultiInteractorsRestQuery.nodesMultiInteractorsRestQuery.source_filterMultiInteractorsRestQuery.stmt_typesMultiInteractorsRestQuery.timeout
MultiInteractorsResultsNetworkSearchQueryNetworkSearchQuery.allowed_nsNetworkSearchQuery.belief_cutoffNetworkSearchQuery.const_cNetworkSearchQuery.const_tkNetworkSearchQuery.cull_best_nodeNetworkSearchQuery.curated_db_onlyNetworkSearchQuery.depth_limitNetworkSearchQuery.filter_curatedNetworkSearchQuery.formatNetworkSearchQuery.fplx_expandNetworkSearchQuery.k_shortestNetworkSearchQuery.max_per_nodeNetworkSearchQuery.mesh_idsNetworkSearchQuery.node_blacklistNetworkSearchQuery.path_lengthNetworkSearchQuery.shared_regulatorsNetworkSearchQuery.signNetworkSearchQuery.sourceNetworkSearchQuery.stmt_filterNetworkSearchQuery.strict_mesh_id_filteringNetworkSearchQuery.targetNetworkSearchQuery.terminal_nsNetworkSearchQuery.two_wayNetworkSearchQuery.user_timeoutNetworkSearchQuery.weightedNetworkSearchQuery.get_filter_options()NetworkSearchQuery.get_hash()NetworkSearchQuery.get_int_sign()NetworkSearchQuery.is_context_weighted()NetworkSearchQuery.is_int_gt2NetworkSearchQuery.is_overall_weighted()NetworkSearchQuery.is_pos_intNetworkSearchQuery.is_positive_intNetworkSearchQuery.reverse_search()
NodeOntologyOptionsOntologyResultsPathPathResultDataResultsSharedInteractorsOptionsSharedInteractorsResultsShortestSimplePathOptionsShortestSimplePathOptions.const_cShortestSimplePathOptions.const_tkShortestSimplePathOptions.hashesShortestSimplePathOptions.ignore_edgesShortestSimplePathOptions.ignore_nodesShortestSimplePathOptions.ref_counts_functionShortestSimplePathOptions.sourceShortestSimplePathOptions.strict_mesh_id_filteringShortestSimplePathOptions.targetShortestSimplePathOptions.weight
StmtDataStmtTypeSupportSubgraphOptionsSubgraphRestQuerySubgraphResultsbasemodel_in_iterable()basemodels_equal()
- Rest Models (
indra_network_search.data_models.rest_models) - Pathfinding (
indra_network_search.pathfinding.pathfinding) - Utility Functions (
indra_network_search.util) - Query Classes (
indra_network_search.query) - Query Handler (
indra_network_search.query_handler) - Rest API (
indra_network_search.rest_api) - Rest API Utilities (
indra_network_search.rest_util) - Result Handlers (
indra_network_search.result_handler) - Search API (
indra_network_search.search_api)IndraNetworkSearchAPIIndraNetworkSearchAPI.breadth_first_search()IndraNetworkSearchAPI.dijkstra()IndraNetworkSearchAPI.get_graph()IndraNetworkSearchAPI.get_node()IndraNetworkSearchAPI.handle_multi_interactors_query()IndraNetworkSearchAPI.handle_query()IndraNetworkSearchAPI.handle_subgraph_query()IndraNetworkSearchAPI.multi_interactors_query()IndraNetworkSearchAPI.path_query()IndraNetworkSearchAPI.shared_parents()IndraNetworkSearchAPI.shared_regulators()IndraNetworkSearchAPI.shared_targets()IndraNetworkSearchAPI.shortest_simple_paths()IndraNetworkSearchAPI.subgraph_query()